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Project Scope |
- Landscape of what CICD is used today across the pharmaverse, and key pre-named reference packages outside the pharmaverse used in clinical reporting (e.g. ggplot2, survminer).
- Summarise integration deployment and release pain points within these R packages.
- Connect with the R Validation Hub and vendor tooling (e.g. Atorus openvalidate) to understand what key devops tooling could be applied to packages to accelerate validation.
- Deliverable 1: Summarise the state of DevOps in the pharmaverse today, with proposals on key tools used already, and where there are gaps.
- Deliverable 2: Develop the existing CICD library used in some pharmaverse R packages (referenced earlier in this proposal) to:
- deliver a recommended suite of CICD tools for R and python packages that improve developer efficiency, and ensure code is well tested and consistent when merged to branch
- provide off-the-shelf configurations to use tools such as docker images managed locally or via Github codespaces to simplify environment management.
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- Hit 1.0 target on GitHub
- v0.9 was presented at the PHUSE US Connect as an oral presentation
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| Objectives & Deliverables | Timelines |
|---|
| Preparation of deliverable for PHUSE US Connect 2024 | Q3 2023 |
| V1.0 of suite/library of CICD tools released | Q4 2023 |
| Support adoption across pharmaverse and biostatistics packages where maintainers are willing to collaborate | Q1 2024 |
| Close V1.0 with hackathon in the lead-up to the PHUSE CSS 2024 | Q2/Q3 2024 |
