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Problem Statement
  • Omics data has the promise of bringing precision medicine and targeted drug discovery to life. However, its use in clinical drug development has been quite limited due to challenges that span technical, practical, ethical and regulatory domains. Here are some of the key problems one might encounter: 
  • Data Integration and Interoperability: 
    • Omics data often comes from multiple sources and platforms, each with its own format and standards. Integrating these heterogeneous datasets into a cohesive whole can be difficult. 
  • Data Quality and Reproducibility: 
    • Ensuring the accuracy, consistency and reproducibility of omics data across laboratories and platforms is challenging. 
  • Data Storage and Management: 
    • Omics data, especially from high-throughput technologies, can be extremely large, requiring substantial storage and computational resources. 
  • Complexity of Data Analysis: 
    • Analysing large, complex omics datasets requires advanced bioinformatics tools and expertise, which may not be readily available in all clinical trial settings. 


Project Scope

The team proposes an initial short-term smaller scope of the WG focused on BioCompute and its implementation. This would ensure a focused short to mid-term delivery. The scope would entail: 

  • Establishing best practices when working with BioCompute 
  • A guide for creating and validating BioCompute Objects 
  • Submission considerations for BioCompute Objects 
  • Sharing of BioCompute Objects across the industry. 

 

Additional long-term work and deliverables related to the general omics data types could include: 

  • Standard Operating Procedures (SOPs): Develop SOPs for the collection, processing and analysis of omics data to ensure consistency and compliance with regulatory standards 
  • Data Integration Framework: Create a framework for integrating omics data with other clinical and nonclinical data sources to provide a comprehensive view of patient health and treatment outcomes 
  • Biomarker Identification: Identify and validate biomarkers for disease diagnosis, prognosis and treatment response using omics data 
  • Precision Medicine Strategies: Develop strategies for implementing precision medicine approaches, including using omics data to tailor patient treatments 
  • Regulatory Compliance Guidelines: Establish guidelines for ensuring omics data and analyses comply with regulatory requirements, including Good Clinical Practice (GCP), CDISC and BioCompute standards 
  • Training Programmes: Develop training programmes for researchers and clinicians on the use of omics data and technologies 
  • Collaborative Research Projects: Initiate collaborative research projects to explore the potential of omics data in drug discovery and development 
  • Quality Control Protocols: Establish quality control protocols for omics data to ensure the accuracy and reliability of the results 



Project LeadsEmail

Adrian Czaban, Novonordisk

adcz@novonordisk.com
Johnathonkeeneyjg@gwu.edu
Nicola Newton, PHUSE Project Assistant

nicky@phuse.global


Status
colourBlue
titleCurrent Status
Q1 2025 

  • Project Accepted




TBC

Objectives & Deliverables

Timelines

White Paper: Using BioCompute in a clinical trial workflow and submission 

White Paper: Framework for integrating omics data with other clinical and nonclinical data sources 

White Paper: Bioinformatics pipelines in a clinical research setting: best practices 

First White Paper - 6 months